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• Assembly tools will not run
  I am trying to run the Unicycler assembler on a fastq paired-end dataset (groomed and joined or u...
• Unicycler jobs - "This job is waiting to run" for 2 days
  Is there something wrong with the computing clusters? I submitted this job almost 48 hours ago an...
• This job is waiting to run for almost 12 hours
  Hi, I'm a newbie using Galaxy. I am trying to create assemblies with Unicycler, but the job is n...
• Create assembly with Unicycler- not working
  I have used the Create assembly with Unicycler tool for genome assembly from Illumina paired end ...
• Jobs In Queue
  I have similar problems. My tophat job was sent 6 hours ago. Now the job is still waiting to be ...
• Why is TopHat not working?
  I have been trying to analyze data for 48 hours now, and TopHat won't execute. It just stays with...
• Mapping Does Not Start
  Hi, I am trying to map sequences with Bowtie. Have been waiting for a few hours now but it still...
• cuffquant job taking way too long
  Hey, so Ive been trying to run a cuffquant job for about 72 hr. Its still in the queue and nothin...
• My galaxy account has suddenly stopped processing. I can upload data, but a single command has been in queue / waiting to run for 48 hours now.
  My galaxy account has suddenly stopped processing. I can upload data, and delete and rename files...
• Tophat job running for two days
  Hello, My Tophat job has been running for two days not. In the meantime I just completed an aut...
• Perpetual "Job Is Waiting To Run"
  Hi there I've recently submitted jobs to the Lastz mapping tool on the main galaxy server and ...
• Unicycler and Trinity Jobs remain in a queued state -- Update: fixed
  I queued two jobs on unicycler on Friday and both are still waiting to run. I have run other job...
• Cuffdiff has been running for over 24 hours, without completing.
  I have run my standard CuffDiff workflow which usually finishes overnight. But this time the job ...
• Job running with on queue datasets
  Hi, I've seen that I can launch jobs with in still in queue datasets. So the job seems to start ...
• galaxy job waiting time
  Hello What is the waiting time for the jobs that were assigned. I have assigned a job with cuffl...
• Any computation limit? Bowtie2 job has been waiting for hours
  Hello. I submitted a job on Galaxy using Bowtie2 to map DNAseq reads onto sacCer3 reference genom...