Question: Possible PATH problem when installing tools in a local
0
gravatar for amitpande74
6 months ago by
amitpande7410
amitpande7410 wrote:

Hi,

I am trying to install oqtans into local galaxy. Oqtans_tools folder has a file tool_conf.xml.oqtans. I copied this into the tool conf xml main file....why does it give error ? https://ibb.co/m5CVfv Can someone help ?

regards.

ADD COMMENTlink modified 6 months ago by Jennifer Hillman Jackson23k • written 6 months ago by amitpande7410
0
gravatar for Jennifer Hillman Jackson
6 months ago by
United States
Jennifer Hillman Jackson23k wrote:

Hello,

It looks as all of the tools not already in the cache failed to load (not just this one, two distinct tool suites in the graphic failed).

  • Are these symbolically linked? Try full paths.
  • Are the paths correct when moved into the master tool_conf.xml? Adjust as needed.
  • Does Galaxy know where to find the target directories? Check the $PATH the Galaxy user is accessing and add as needed.

Thanks, Jen, Galaxy team

ADD COMMENTlink modified 6 months ago • written 6 months ago by Jennifer Hillman Jackson23k
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