Question: Citing Picrust & KEGG database
gravatar for zoya.grigoryan
22 months ago by
zoya.grigoryan10 wrote:

Hello! Can anyone point me in the right direction? I am trying to cite my picrust data, and would like to specify which KEGG database was referenced. It seems to be updated frequently. Thank you in advance!

kegg picrust • 544 views
ADD COMMENTlink modified 22 months ago by Jennifer Hillman Jackson25k • written 22 months ago by zoya.grigoryan10
gravatar for Jennifer Hillman Jackson
22 months ago by
United States
Jennifer Hillman Jackson25k wrote:


If you are using Picrust within Galaxy with the pre-computed reference COG files, this is the source most use (from the Tool Shed's web page for the tool - drill down into "Valid Tools" to view in full):

Reference Data

Precalculated files:

Some other useful info is in this Q&A post at the tool's google group:!topic/picrust-users/bJMbEFD2OUU

To be absolutely certain about the KEGG version in use at any particular public server, contact the administrators and they can clarify.

Hope this helps! Jen, Galaxy team

ADD COMMENTlink written 22 months ago by Jennifer Hillman Jackson25k

Thank you. This seems to indicate the version of PICRUSt, but not which update of the KEGG database. May have to contact admins.

ADD REPLYlink written 22 months ago by zoya.grigoryan10
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