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• No Kraken database option in galaxy
  Hello, I am trying to use Kraken in Galaxy. But under "select a kraken database", there is no opt...
• Kraken database question
  I would like to use Kraken on the Galaxy website but when I try to select a Kraken database it sa...
• "select a kraken database"
  Hi all, I'm new in the Galaxy... I uploaded a FastQ file with 16S amplicons in order to assign ...
• Convert Kraken data to Galaxy taxonomy - missing database (usegalaxy)?
  Hi, I'm trying to use Convert Kraken data to Galaxy taxonomy representation (Galaxy Version 1.1),...
• Can you upload your own KrakenDB to local instance of Galaxy?
  I've seen a couple questions about this, but none of the answers addressed my particular question...
• Select a taxonomy database
  Hello! I'm trying to convert Kraken data to Galaxy taxonomy representation but there's no options...
• no kraken database
  There is no kraken database on galaxy. Can one be included in galaxy? Looking to run a sequence
• Kraken run time
  I have been running 0.2-2M 150 bp kraken jobs on the bacterial database on a private cloudman clu...
• Update Kraken version on Galaxy Main?
  Would it be possible to update the version of Kraken on Galaxy Main? The current version is seve...
• Fetch Taxonomic Representation and Kraken
  Hello, I need to do a quick analysis of taxonomy for a small set of Illumina reads (~1200), and ...
• issue with realigner target creator
  I read about a few other people's posts concerning realigner target creator but felt that my issu...
• Using Annovar in a Workflow
  Hello everyone, I would like to use Annovar (developed by the devteam) in a workflow. To do so I...
• Genome source from history in SnpEff
  Hello, I am using SnpEff in Galaxy to add variant information to my vcf file. Please let me ask 2...
• Add a new reference genome
  Dear sir,    Sorry to bother you. I am not sure it is right to contact with you, but i need some...
• Is there a way to fetch taxonomic information for a list of GI numbers in Galaxy?
  Hello, I performed a MEGABLAST analysis a few days ago, but I am now unable to automatically ret...
• local galaxy installed tool not work
  I installed a local Galaxy in Ubuntu14.04, it can visit by website 127.0.0.1:8080, then I add a t...
• Uploading NCBI Genome
  HI all, I am having difficulty uploading a complete genome in fasta format. I have located the g...
• Is it possible to auto-detect the database/genome of the input file?
  Hi. I am writing xml scripts that will ask the users to pick a reference genome (e.g. hg19, mm10,...
• 2 Bug Reports
  I'm reporting two problems on the most recent Galaxy (lavender background, http://g2.bx.psu.edu:8...