Question: LEfSe output different from before, using same input file and parameters
gravatar for zoya.grigoryan
22 months ago by
zoya.grigoryan10 wrote:

Can someone please weigh in? Perhaps there has been a change in the LEfSe software? We used our data from 2 years ago, and it is giving us a different out put than it did then. Has anyone experienced this? Thank you!

lefse • 511 views
ADD COMMENTlink modified 22 months ago by Jennifer Hillman Jackson25k • written 22 months ago by zoya.grigoryan10
gravatar for Jennifer Hillman Jackson
22 months ago by
United States
Jennifer Hillman Jackson25k wrote:


This tool has been updated once - there are two versions:

I suggest reviewing the tool version, wrapper version, parameters, and input/reference datasets used with LEfSe for the prior and current runs. The release notes for the tool will explain 3rd party changes. Also review the prior steps, tool version used for those, parameters, and the like.

Take care, Jen, Galaxy team

ADD COMMENTlink written 22 months ago by Jennifer Hillman Jackson25k
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