Question: QIIME Virtual Box to LEfSe input
0
gravatar for shashank_guptapnp
4.4 years ago by
United States
shashank_guptapnp0 wrote:

I have done analysis using QIIME Virtual Box, how can i use QIIME output for LEfSe input?

qiime software error galaxy • 2.3k views
ADD COMMENTlink modified 4.4 years ago by Jennifer Hillman Jackson25k • written 4.4 years ago by shashank_guptapnp0
0
gravatar for Jennifer Hillman Jackson
4.4 years ago by
United States
Jennifer Hillman Jackson25k wrote:

Hi,

Text Manipulation tools can be used on any basic tabular format data on any Galaxy. 

Tool Shed repository "lefse" (http://toolshed.g2.bx.psu.edu/) has data loading/formatting documentation in the description.

And the Huttenhower Galaxy server (http://wiki.galaxyproject.org/PublicGalaxyServers#Huttenhower_Lab) offers direct support for their tools - if that is where you are working.

Best, Jen, Galaxy team

 

 

ADD COMMENTlink written 4.4 years ago by Jennifer Hillman Jackson25k
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