dear sir i have run tophat on reads trimmed by trim galore with reference to hg19. i am getting red colored error. i have tried it many times. i ahve downloaded the genome from ucsc browser as well. i ghave trimmed the reads with trim galore using 5' AGTCCGACGATC nad 3' ATCTCGTATGCC adapters. please help. i am stuck. thanks in advance
The Galaxy Main server at http://usegalaxy.org is down for maintenance today. Jobs may have been terminated before that started, as a preparation step. We expect the server to be back up around 5pm EST.
Please try again then and if the problems continue, send in a bug report from the error dataset. Please leave all inputs and output undeleted and include a link to this biostars post in the comments. https://wiki.galaxyproject.org/Support#Reporting_tool_errors
Best, Jen, Galaxy team