Question: (Closed) qiime warning or error
0
yychangsd • 30 wrote:
I installed qiime.
And run the pick_open_reference_otus.py
I got this:
"version is 2.1\n".format(ver=ver), UserWarning)
/usr/local/lib/python2.7/dist-packages/pandas/computation/__init__.py:25: UserWarning: The installed version of numexpr 2.0.1 is not supported in pandas and will be not be used
The minimum supported version is 2.1
But it still gives me some output like this:
$ ls
final_otu_map_mc2.txt index.html new_refseqs.fna otu_table_mc2_w_tax.biom pynast_aligned_seqs rep_set.tre step4_otus
final_otu_map.txt log_20161013101158.txt otu_table_mc2.biom otu_table_mc2_w_tax_no_pynast_failures.biom rep_set.fna step1_otus uclust_assigned_taxonomy
But then I realized there is no step2_otus and step3_otus.
So my question is :
Is this warning or error? And how to fix it?
Thanks so much!!
Hello yychangsd!
We believe that this post does not fit the main topic of this site.
Not about Galaxy. Try a general forum such as https://www.biostars.org.
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