Hi, I am installing TMAP in local galaxy, but when I run it using commonly settings I found the next error report
The alignment failed. Error mapping sequence. src/map/mapall/tmap_map_all.c:175: in function "tmap_map_all_opt_parse" No stages were specified warning: command line argument trying to continue... [31mtmap: [37mtorrent mapper [0m [31mVersion: [37m3.4.1 [0m [31mgit: [37m39c56e6cd6471b8d796e3b8af2c00206f1002fae [0m [31mWeb Site: [37mhttp://github.com/iontorrent/tmap [0m [31mContact: [37mhttp://ioncommunity.lifetechnologies.com [0m non-option command-line-elements: fastq: unknown command line option map1: recognized an algorithm name, did you forget to include the stage parameter? map2: recognized an algorithm name, did you forget to include the stage parameter? map3: recognized an algorithm name, did you forget to include the stage parameter?
Anyone know what is the problem?
I am installed the version
that is OK? or I need to install an older version?