Data Upload Question

Question: Data Upload Question

7.8 years ago by

Haiping Hao • 30 wrote:

Hi, I am new to Galaxy and trying to upload some data files. The size of my compressed file is about 7 GB, how long it will take to upload one file? Thank you. Haiping -- JHMI Deep Sequencing and Microarray Core Facility at BRB - Your source for quality service on Microarray studies, NextGen Sequencing, and Data Analysis. http://www.microarray.jhmi.edu/ Haiping Hao Ph.D. Manager Johns Hopkins University Deep Sequencing and Microarray Core 733 N. Broadway, Rm 359 Baltimore, MD 21205 hhao@jhmi.edu Phone: 443-287-9056 Fax: 410-502-6666

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modified 6.4 years ago by Fatih Ozsolak • 50 • written 7.8 years ago by Haiping Hao • 30

7.8 years ago by

vasu punj • 360

vasu punj • 360 wrote:

may like to use ftp. Vasu Subject: [galaxy-user] Data upload question To: galaxy-user@lists.bx.psu.edu Date: Tuesday, February 15, 2011, 1:32 PM Hi, I am new to Galaxy and trying to upload some data files. The size of my compressed file is about 7 GB, how long it will take to upload one file? Thank you. Haiping -- JHMI Deep Sequencing and Microarray Core Facility at BRB - Your source for quality service on Microarray studies, NextGen Sequencing, and Data Analysis. http://www.microarray.jhmi.edu/ Haiping Hao Ph.D. Manager Johns Hopkins University Deep Sequencing and Microarray Core 733 N. Broadway, Rm 359 Baltimore, MD 21205 hhao@jhmi.edu Phone: 443-287-9056 Fax: 410-502-6666 _______________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/

ADD COMMENT • link written 7.8 years ago by vasu punj • 360

7.8 years ago by

Jennifer Hillman Jackson ♦ 25k

United States

Jennifer Hillman Jackson ♦ 25k wrote:

Hi Haiping, The FTP upload time can vary due to the connection speed and how busy the Galaxy web site is. The load from your FTP file list into a history can also vary - some file types take a bit longer as Galaxy processes the metadata attributes. Please give these both a try and let us know if it takes what seems like a very long time (over 24hrs). Thanks, Jen Galaxy team -- Jennifer Jackson http://usegalaxy.org http://galaxyproject.org

ADD COMMENT • link written 7.8 years ago by Jennifer Hillman Jackson ♦ 25k

6.4 years ago by

Fatih Ozsolak • 50

Fatih Ozsolak • 50 wrote:

Hi Jennifer, I had some uploads that were probably stuck and going on for 5-7 days. I deleted them and uploaded 2 new files for upload. can you please check and see if the upload is happening normally for these files? Thanks a lot for your help and patience thanks, fatih

ADD COMMENT • link written 6.4 years ago by Fatih Ozsolak • 50

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