Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Forum
Planet
All »
Home
Log In
Question: Galaxy jobs for Cufflinks in waiting (gray) mode x 2 days.
1
gravatar for larry.moss
2.5 years ago by
larry.moss • 10
United States
larry.moss • 10 wrote:

Galaxy jobs (2) for Cufflinks in waiting (gray) mode x 2 days. No problem alerts or error messages that I can find.
galaxy • 747 views
ADD COMMENT • link •
modified 2.5 years ago by juliaarand • 0 • written 2.5 years ago by larry.moss • 10

I have similar issues with CloudMap. Mapping with BWA Illumina is gray since 3 days!

ADD REPLY • link modified 2.5 years ago • written 2.5 years ago by zeus.sravanthi • 0

I can't answer your question but thought it useful to let you know my Tophat jobs have also been "grey" for 48 hours...

ADD REPLY • link written 2.5 years ago by daniel.tonge • 10

The same happened with BWA for Illumina, but it is working now.

ADD REPLY • link written 2.5 years ago by bryantl • 90

the cuffdiff tool and the cuffmerge tool are also not running, they have stopped again.

ADD REPLY • link written 2.5 years ago by brarp0619 • 10

Same for me. No job running since Friday (uploading data from the FTP and FASTQ groomer). Ill send an email. Thanks

ADD REPLY • link written 2.5 years ago by juliaarand • 0

I have the same problem since Friday with a few jobs waiting to run.

ADD REPLY • link written 2.5 years ago by tsh7 • 0
0
gravatar for Jennifer Hillman Jackson
2.5 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

There was a bit of a backup for jobs earlier in the week. This is clearing up as the new Jetstream cluster is becoming fully configured. Jobs may queue for a longer time period right now than usual (and what we expect going forward). Allow queued jobs to run, without deleting and restarting, which only adds to delays in the vast majority of cases.

If the jobs have not started yet after two days, any that commented can send us an email from the same email address as your Galaxy account and we can take a closer look to be certain more is not going on. Send to galaxy-bugs@lists.galaxyproject.org and please include a link to this post so we can link the two.

Thanks, Jen, Galaxy team
ADD COMMENT • link written 2.5 years ago by Jennifer Hillman Jackson ♦ 25k
Please log in to add an answer.

Similar posts • Search »

Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 172 users visited in the last hour