rna seq NGS dataets for human psychiatric disorders

Question: rna seq NGS dataets for human psychiatric disorders

2.6 years ago by

pinakin76 • 0

pinakin76 • 0 wrote:

**> i am searching for RNA-Seq data sets of psychiatric disorders in

humans esp; OCD, MDD and Panic Disorders with GAD and Phobias. desperately seeking help**

rna-seq snp galaxy • 647 views

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modified 2.5 years ago • written 2.6 years ago by pinakin76 • 0

2.5 years ago by

Jennifer Hillman Jackson ♦ 25k

United States

Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

Have you tried searching at http://www.ebi.ac.uk/ (this is just one source - there are many)? Or a publication search could be very helpful in locating datasets of interest. Where the source data is located should be disclosed in any publication. If not, you may want to find another, or could consider contacting the authors for clarification.

There is a tool built-in under "Get Data" to search and retrieve data from EBI SRA. Import using the link for "send to Galaxy": https://wiki.galaxyproject.org/Support#Get_Data:__EBI-SRA

That said, any data can be loaded if in the correct format for the target tools. If there is a URL retrieval method disclosed by the source, use the Upload tool. If you have the data already downloaded locally (or this is the only way to retrieve it, use FTP to ge the data into Galaxy.

How to do these operations is in the same section as the other data loading help in the link above. But please let us know if you need any clarification or run into problems.

Thanks, Jen, Galaxy team

ADD COMMENT • link written 2.5 years ago by Jennifer Hillman Jackson ♦ 25k

*HI I did exhaustive search on EBI and related DBs for NGS data om panic and anxiety disorders. can hardly find any. pls help ..... :pinakin*strong text**

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ADD REPLY • link written 2.5 years ago by pinakin76 • 0

2.5 years ago by

pinakin76 • 0

pinakin76 • 0 wrote:

THANKS A TON , JENNIFER

ADD COMMENT • link written 2.5 years ago by pinakin76 • 0

2.5 years ago by

pinakin76 • 0

pinakin76 • 0 wrote:

need data sets for NGS analysis on panic and anxiety disorders with phobias

ADD COMMENT • link written 2.5 years ago by pinakin76 • 0

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