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Question: Stitch MAF blocks returns errors
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gravatar for seemann
2.6 years ago by
seemann • 0
seemann • 0 wrote:

The 'Stitch MAF blocks' command returns the following errors for input BED file of 3 entries:

Error loading region positions from input line 0: global name 'lzo' is not defined

Error loading region positions from input line 1: global name 'lzo' is not defined

Error loading region positions from input line 2: global name 'lzo' is not defined

No re
software error • 497 views
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modified 2.6 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.6 years ago by seemann • 0
0
gravatar for Jennifer Hillman Jackson
2.6 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

There is currently an open issue with these tools. A fix is pending.

Please follow progress here: https://github.com/galaxyproject/galaxy/issues/2187

And downstream testing at Galaxy Main (http://usegalaxy.org) here: https://github.com/jennaj/support-known-issues/wiki

See 12: Fetch Alignments/Sequences MAF tools have a dependency issue

Our apologies for the confusion, Jen, Galaxy team
ADD COMMENT • link written 2.6 years ago by Jennifer Hillman Jackson ♦ 25k
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