I have recently updated Galaxy to the latest release and I am having a couple of issues.
- When updating my mySQL database I got the following error:
OperationalError: (_mysql_exceptions.OperationalError) (1059, "Identifier name 'workflow_invocation_to_subworkflow_invocation_association_ibfk_1' is too long")
I am using mysql version 14.14. I know that mySQL has limits to the length of names, is there anyway to get around this without switching to postgres?
The server still starts and seems to (mostly) run without any issues.
- Visualisations are not showing up correctly for bed and bam format. The tracks do not show any errors and appear to be "prepared" okay but they are just empty. BigWig files seem to be fine. I have followed the visualisation setup below to make sure everything is up to date but I must be missing something somewhere. https://wiki.galaxyproject.org/VisualizationSetup
Thanks for any help on either of these topics.