Question: Trio analysis capabilities
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gravatar for jaordonez2003
2.7 years ago by
jaordonez20030 wrote:

Does Galaxy have capabilities to do Variant Call among TRIOS (parent/child) or any other TRIO analysis tools?

galaxy • 604 views
ADD COMMENTlink modified 2.7 years ago by Jennifer Hillman Jackson25k • written 2.7 years ago by jaordonez20030
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gravatar for Jennifer Hillman Jackson
2.7 years ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

See the tools in the category Variant Analysis in the Galaxy Main Tool Shed for the choices. If the tool you wish you use is not present or does not have the option implemented (for example, VarScan does not have the trio option added to the tool form (yet)), the target tool or option could be wrapped for use in Galaxy.

The majority of these tools would be for use in a local or cloud Galaxy.

https://wiki.galaxyproject.org/Support#About_Galaxy

Thanks, Jen, Galaxy team

ADD COMMENTlink written 2.7 years ago by Jennifer Hillman Jackson25k

Thanks Jen.

ADD REPLYlink written 2.7 years ago by jaordonez20030
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