As far as I understand, the Kraken databases are in the process of being switched from the test server to the primary server and that is why there are no database options under Create Kraken. So, I have two questions:
I have Blastn results > 65K gene bank GI and/or Accession numbers. I tired running those in the testgalaxyproject.org and got back Eukarya taxonomy, almost none of the Bacteria. And the amount of taxa returned was about 20 times less of the submitted. So I assume that my dataset is too big for the test version and the wise thing to do, would be to hold on tight and wait =)
When do you guys estimate to complete the work on Create Kraken function and how are you going to let us know about it?
I am a bit in a hurry to get that taxonomy )))