Question: How to create a pseudomolecule?
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gravatar for vidushipujni
2.9 years ago by
vidushipujni • 0 wrote:

Hello

I am thankful to the galaxy team for providing a wonderful platform for analyses. I am using this largely for my analyses. In my project I have generated a metatranscriptome assembly using RNA-seq data for the plant genome. Now moving forward in the project. I would like to create a pseudomolecule from consensus sequence between the assembly and reference genome. I am sure a lot of scientists would have done this earlier.

Can anybody please suggest any ideas how to go about doing this in galaxy?

 

Thanks 

Vids

ADD COMMENT • link • modified 2.9 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.9 years ago by vidushipujni • 0
0
gravatar for Jennifer Hillman Jackson
2.9 years ago by
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

Please see this post: How to download blastn to scaffold from toolshed?

Thanks, Jen, Galaxy team

ADD COMMENT • link written 2.9 years ago by Jennifer Hillman Jackson ♦ 25k
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