Question: Pulsar architecture tips
1
gravatar for Remi Marenco
2.8 years ago by
Remi Marenco80
Washington DC
Remi Marenco80 wrote:

Hi :),

We are actually trying to find a solution to avoid File Sharing System between our Galaxy (server) and the cluster which should run our (galaxy) jobs.

We found out Pulsar could fit in our needs but we are not allowed to install Pulsar on the cluster.

So...how do you think we could manage this? Is there some configuration to do in Pulsar to install it on a server and allow the magic to happen between Galaxy and the cluster?

Thank you for the help! :D 

ADD COMMENTlink written 2.8 years ago by Remi Marenco80
0
gravatar for Bjoern Gruening
2.8 years ago by
Bjoern Gruening5.1k
Germany
Bjoern Gruening5.1k wrote:

Hi Remi, what do you mean by "not allowed"? You can run Pulsar as unprivileged user, but you need to get it running :)

ADD COMMENTlink written 2.8 years ago by Bjoern Gruening5.1k

Hi Bjoern!

Thanks for taking the time to answer to my question. IT did not want to install Pulsar on the Cluster directly (It makes sense),

We now found a way to make it work: IT provided us a Cluster Submit Node in a VM and we installed Pulsar on it. Pulsar uses DRMAA/LSF ;).

ADD REPLYlink written 2.8 years ago by Remi Marenco80
1

Awesome! Mind sharing your solution here? https://wiki.galaxyproject.org/Community/Deployments

ADD REPLYlink written 2.8 years ago by Bjoern Gruening5.1k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 125 users visited in the last hour