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Question: "\${GALAXY_SLOTS:-4}" usage help
0
gravatar for rich_jp
2.6 years ago by
rich_jp • 0
United Kingdom
rich_jp • 0 wrote:

Could somebody point me to a good explanation of how to setup and use GALAXY_SLOTS correctly on my server?

A basic explanation is good but I also make use of Pulsar to stage some jobs on our cluster here (my machine is 4-core and cluster I use is 12-core) so I am wondering if GALAXY_SLOTS can handle this (so I don't need to specify exact thread numbers in e.g. tool wrappers)

Thanks, Richard
slots multithreading galaxy_slots galaxy multicore • 785 views
ADD COMMENT • link •
modified 2.6 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.6 years ago by rich_jp • 0
0
gravatar for Hotz, Hans-Rudolf
2.6 years ago by
Hotz, Hans-Rudolf • 1.8k
Switzerland
Hotz, Hans-Rudolf • 1.8k wrote:

Hi Richard

Please don't double post here and on 'galaxy-dev', where your question has been answerd already by Nate.

Regards, Hans-Rudolf
ADD COMMENT • link written 2.6 years ago by Hotz, Hans-Rudolf • 1.8k

For others that may run into this same issue: https://biostar.usegalaxy.org/p/10158 which points to http://dev.list.galaxyproject.org/quot-GALAXY-SLOTS-4-quot-usage-help-td4669264.html

Related: https://biostar.usegalaxy.org/p/21044/

ADD REPLY • link modified 8 months ago • written 8 months ago by Jennifer Hillman Jackson ♦ 25k
0
gravatar for rich_jp
2.6 years ago by
rich_jp • 0
United Kingdom
rich_jp • 0 wrote:

Hi Hans-Rudolf,

Sorry - I had though that this forum and the galaxy-dev list were monitored by different sets of folks. Which would be the preferred place to post?

Thanks, Richard
ADD COMMENT • link written 2.6 years ago by rich_jp • 0

Techincal questions reach more of the development community at the galaxy-dev mailing list, or you can ask most of the same people at Gitter for quick questions. Biostars is good for "using Galaxy" questions. That said, there is some overlap in content, but it is best to only ask at one support channel.

ADD REPLY • link written 8 months ago by Jennifer Hillman Jackson ♦ 25k
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