Question: local Galaxy server - can't upload any files
gravatar for kajocina
3.2 years ago by
European Union
kajocina0 wrote:

Dear Galaxy Community,


I just installed local Galaxy on my Linux (Ubuntu 14.04) for few tests. I am planning on developing a tool for my group and wanted to first try it out on my PC. However, after successful installation and running Galaxy, I entered the GUI on and tried without success to upload a local file from my disk.

I click on Get Data / Upload File from your computer, I choose a 5MB .csv file and wait until 100%. Then the file shows up in the History panel on the right and turns into red. This happens to all possible files or pasted-in data. The error returned is as follows:

Traceback (most recent call last):
  File "/home/XXX/Software/galaxy/tools/data_source/", line 18, in <module>
    import galaxy.model  # noqa
  File "/home/XXX/Software/galaxy/lib/galaxy/model/", line 9, in <module>
  File "/home/XXX/Software/galaxy/lib/galaxy/eggs/", line 479, in require
    return c[req.project_name].require()
  File "/home/XXX/Software/galaxy/lib/galaxy/eggs/", line 272, in require
    dists = self.resolve()
  File "/home/XXX/Software/galaxy/lib/galaxy/eggs/", line 220, in resolve
    if e.args[1].key != e.args[0].key:
IndexError: tuple index out of range


Any ideas what could that be ? I am running Python 2.7.6.


Best regards,


galaxy • 845 views
ADD COMMENTlink written 3.2 years ago by kajocina0
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