Question: workflow API problem
0
gravatar for sfischer
2.5 years ago by
sfischer30
United States
sfischer30 wrote:

Hi,

I issue this call to the API:

https://usegalaxy.org/api/workflows/ba06423ff18d37cc/invocations?key=REDACTED

and get this response:

[
  {
    "update_time": "2015-08-06T11:51:49.365687",
    "uuid": "665407a8-3c31-11e5-bd2a-005056a52a46",
    "history_id": "148c3a937daeb25d",
    "state": "scheduled",
    "workflow_id": "2f758b3dbd05a2fd",
    "model_class": "WorkflowInvocation",
    "id": "b15748f3ceed3c8a"
  }
]

My first question is why is the workflow_id in the JSON different than the workflow ID in the request?

My second question is that in the API docs, it shows this:

GET /api/workflows/{workflow_id}/invocation/{invocation_id}

I tried that with all combinations of IDs i could think of, but always get ERROR: NOT FOUND

https://usegalaxy.org/api/workflows/ba06423ff18d37cc/invocation/2f758b3dbd05a2fd?key=REDACTED

https://usegalaxy.org/api/workflows/ba06423ff18d37cc/invocation/b15748f3ceed3c8a?key=REDACTED

https://usegalaxy.org/api/workflows/2f758b3dbd05a2fd/invocation/b15748f3ceed3c8a?key=REDACTED

what am i doing wrong?

thanks,

steve

workflow api • 663 views
ADD COMMENTlink modified 2.5 years ago by Dannon Baker3.7k • written 2.5 years ago by sfischer30
0
gravatar for sfischer
2.5 years ago by
sfischer30
United States
sfischer30 wrote:

OK, sorry.  I figured it out.  It is a typo in the API Documentation. 

http://galaxy-dist.readthedocs.org/en/latest/lib/galaxy.webapps.galaxy.api.html#module-galaxy.webapps.galaxy.api.workflows

The doc says:

GET /api/workflows/{workflow_id}/invocation/{invocation_id}

but should say:

GET /api/workflows/{workflow_id}/invocations/{invocation_id}

this request worked:

https://usegalaxy.org/api/workflows/ba06423ff18d37cc/invocations/b15748f3ceed3c8a?key=REDACTED

steve

ADD COMMENTlink modified 2.5 years ago by Dannon Baker3.7k • written 2.5 years ago by sfischer30

Thanks for noticing this, I've opened a PR to correct this in https://github.com/galaxyproject/galaxy/pull/565

ADD REPLYlink written 2.5 years ago by Dannon Baker3.7k
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