I have 20 Fastq files from 16S rRNA Illumina run.
I am trying to learn how to analyze these data.
1. Could someone recommend a complete workflow for metagenome analysis in Galaxy?
2. The 20 files are from 2 groups of patients (n=10) and normal control (n=10). During an analysis (galaxy workflow), when is the best time to group files into a 'patient' or 'mormal'.