Question: Job submission failed
0
gravatar for zhangzb554
3.3 years ago by
zhangzb5540
China
zhangzb5540 wrote:

Hi every one :

I could not submit my job when I use Mgene,the detail is as below:

{
    "tool_id": "mgene_tools_instructions_0.4",
    "tool_version": "0.4",
    "inputs": {
        "organism": "elegans"
    }
}

thank you for helping me!

galaxy • 623 views
ADD COMMENTlink modified 3.3 years ago • written 3.3 years ago by zhangzb5540
0
gravatar for Jennifer Hillman Jackson
3.3 years ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

This is a tool wrapper that you are creating? Are you able to run it line-command?

Thanks, Jen, Galaxy team

ADD COMMENTlink written 3.3 years ago by Jennifer Hillman Jackson25k

Hi jen :

Thank you for your quick reply , Mgene is a gene finding tool on https://galaxy.cbio.mskcc.org/, I just login its interface and upload my own data and execute job (in mGene.web modules (v0.4),GenomeTool (v0.4) ). I really don't know whether I'm creating it . Additionally, when I use their internal data , the error still exists and the prompt message is similar to what I mentioned in my question. 

ADD REPLYlink written 3.3 years ago by zhangzb5540

Below is submission information use my own data:

{
    "tool_id": "genometool",
    "tool_version": "0.4",
    "inputs": {
        "history_vs_pretrained|source": "history",
        "history_vs_pretrained|fasta_input": {
            "batch": false,
            "values": [
                {
                    "src": "hda",
                    "id_uncoded": 685590,
                    "hid": 1,
                    "id": "b0aa6dc279624da5",
                    "name": "Schizophyllum_commune.fasta"
                }
            ]
        }
    }
}

ADD REPLYlink written 3.3 years ago by zhangzb5540
0
gravatar for zhangzb554
3.3 years ago by
zhangzb5540
China
zhangzb5540 wrote:

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ADD COMMENTlink modified 3.3 years ago • written 3.3 years ago by zhangzb5540
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