Question: Galaxy February 8, 2013 Distribution & News Brief
0
Jennifer Hillman Jackson ♦ 25k wrote:
Galaxy Feb 8, 2013 Distribution & News Brief
<http: wiki.galaxyproject.org="" news="" 2013_02_08_galaxynewsbrief="">
*Complete News Brief
<http: wiki.galaxyproject.org="" devnewsbriefs="" 2013_02_08="">
*
*Highlights:*
*
/Improvements/ to our release process
<http: wiki.galaxyproject.org="" devnewsbriefs="" 2013_02_08#improvemen="" ts_to_release_process="">.
*Release tag must be used in the hg update command to upgrade*.
More
at *usegalaxy.org
<http: wiki.galaxyproject.org="" admin="" get%20galaxy="">*.
*
Tool Shed /Complex repository dependencies/
<http: wiki.galaxyproject.org="" definingrepositorydependencies#comp="" lex_repository_dependencies:_tool_dependency_definitions_that_contain_="" repository_dependency_definitions="">
are introduced, streamlining core dependency use across individual
tools.
* Also updated in the Tool Shed: multiple repository installation,
dependency installation (when defined), and many usability
enhancements and fixes.
*
New /Bedgraph-to-bigwig/
<http: wiki.galaxyproject.org="" learn="" datatypes#bedgraph=""> tool plus
/Filter/ tool updated.
*
/Workflows/ now include option to export an image and the core
/Framework/ now allows more unified reference genome usage and
access.
*
/Ten Community Pull-Requests/ incorporated, plus another
contribution to the tool Shed, addressing general usability, API,
tools, error handling, workflows, and more. Thanks!!
* Review highlights from the latest monthly */Galaxy Update/*
<http: wiki.galaxyproject.org="" galaxyupdates=""> newsletter and
Galaxy
Project Stats
<http: wiki.galaxyproject.org="" galaxy%20project="" statistics="">!
* Plus bug fixes and related enhancements for visualizations,
histories, workflows, and tools.
*http://getgalaxy.org*
*http://bitbucket.org/galaxy/galaxy-dist*
*http://galaxy-dist.readthedocs.org
*
new: $ hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist
upgrade: $ hg pull
$ hg update release_2013.02.08
To ensure that you continue to receive updates about *Galaxy
Distributions and News Briefs*
<http: wiki.galaxyproject.org="" devnewsbriefs="">, be sure to subscribe to
the Galaxy-Announce mailing list
<http: wiki.galaxyproject.org="" mailinglists#the_lists="">, a low-volume
list dedicated to News Items <http: wiki.galaxyproject.org="" news=""> and
priority messages from the Galaxy community
<http: wiki.galaxyproject.org="" community=""> and project core team
<http: wiki.galaxyproject.org="" galaxy%20project="">.
/Thanks for using Galaxy,/
The Galaxy Team <http: wiki.galaxyproject.org="" galaxy%20team="">