Question: Data Library And Symbolic Link
gravatar for MONJEAUD
6.0 years ago by
MONJEAUD10 wrote:
Hi all, I created data libraries using options "Upload files from filesystem paths" and "Link to files without copying into Galaxy". It worked but I use symbolic links because my data are frequently updated. The problem is that Galaxy takes the real link ("external_filename" column in "dataset" table) and doesn't find the files. Is there a way for galaxy to take the symbolic link in the database. Thanks in advance for your help! Cheers, -- Cyril Monjeaud Equipe Symbiose / Plate-forme GenOuest Bureau D156 IRISA-INRIA, Campus de Beaulieu 35042 Rennes cedex, France Tél: +33 (0) 2 99 84 74 17
galaxy • 1.0k views
ADD COMMENTlink modified 6.0 years ago by Jennifer Hillman Jackson25k • written 6.0 years ago by MONJEAUD10
gravatar for Jennifer Hillman Jackson
6.0 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hello, The guidelines regarding symbolic links in data library uploads in covered (with examples) in this wiki: ry%20Files The basic of library loading are in this wiki, including instructions for uploading a new version of existing files: Going forward, you will want to use the mailing list instead for questions about local installs - this will give your questions the best visibility to the development community: Hopefully this helps! Jen Galaxy team -- Jennifer Jackson
ADD COMMENTlink written 6.0 years ago by Jennifer Hillman Jackson25k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 179 users visited in the last hour