Question: Join GEO2R microarray data and ChIP seq data using gene symbol
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gravatar for maryjolaws
3.1 years ago by
maryjolaws • 0
United States
maryjolaws • 0 wrote:

Using GEO2R in GEO Omnibus, I have analyzed public available data and exported deferentially regulated genes as a text file. The file has the following columns: affymetrix ID"    "adj.P.Val"    "P.Value"    "Gene.symbol"    "Gene.title"

I would like to join this data with a BED file of ChIP seq data I have using the gene symbol. When I run the 'join' function it comes back with nothing. Just says empty. What am I doing wrong? 

 

join • 769 views
ADD COMMENT • link • written 3.1 years ago by maryjolaws • 0

Do you have the Quotation mark as part of your data?

ADD REPLY • link written 3.1 years ago by Bjoern Gruening ♦ 5.1k
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