Question: Link To Display Bed Files In Ucsc Genome Browser
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Lucy A. Skrabanek • 20 wrote:
Dear all,
For BED files, there used to be an option in the preview window to
visualize them in the UCSC Genome Browser, but that seems to have
disappeared. Specifically, from a TopHat/Cufflinks run, I used to be
able to visualize the accepted hits, the splice junctions and the
assembled transcripts datasets in the UCSC Genome browser by simply
clicking on the 'display at UCSC' link. This link is still available
for the accepted hits dataset, but seems to have disappeared for the
other two datasets. I realize I can still visualize these datasets by
downloading them (although this seems somewhat less convenient). Is
the loss of this link to UCSC intentional?
Thanks,
luce
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modified 6.0 years ago
by
Jennifer Hillman Jackson ♦ 25k
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written
6.0 years ago by
Lucy A. Skrabanek • 20
