Question: Freebayes Repeated Error
0
Dalgard, Clifton • 10 wrote:
Dear Team and Galaxy Users,
I have been running FreeBayes on BAM output generated from pooled
sequencing of 30 haploid yeast genomes with a total of 90 million
reads. I
am observing an inconsistent but repeated error using FreeBayes which
states:
An error occurred running this job:*terminate called after throwing an
instance of 'std::out_of_range'
what(): vector<bool>::_M_range_check
Aborted*
*
*
Interestingly, I can view partial output of the tool run and after
running
the tool repeated with the same data and parameters, I have noticed
that
the partial output has different lengths (and thus suggests it is not
data
dependent).
Is there any insight to why FreeBayes won't complete?
Thank you,
Clifton