Question: Using Tool On Input Data Set
0
gravatar for kauerbach@comcast.net
6.0 years ago by
kauerbach@comcast.net40 wrote:
Hello, I'm new to Galaxy and have a very basic question.  If I upload a dataset, (say, a protein sequence file in fasta format), and I want to use one of the tools on this dataset, what do I have to do to make the tool aware of my dataset?  When I tried it the tools did not know that my uploaded data file existed. Thank you.
galaxy • 720 views
ADD COMMENTlink modified 6.0 years ago by Peter Cock1.4k • written 6.0 years ago by kauerbach@comcast.net40
0
gravatar for Peter Cock
6.0 years ago by
Peter Cock1.4k
European Union
Peter Cock1.4k wrote:
You need to make sure your dataset is recognised as 'fasta', which can be checked/edited via the 'pencil' icon. As long as the tool's XML file defines the input as type 'fasta', then it should offer any 'fasta' format files in the *current* history as inputs when used. Peter
ADD COMMENTlink written 6.0 years ago by Peter Cock1.4k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 118 users visited in the last hour