Question: How to add a single dataset into an existing dataset list in Galaxy
gravatar for h.z.nenseth
10 months ago by
h.z.nenseth0 wrote:

Hi, I am a new beginnner doing ChIP-seq analysis using Galaxy. For the analysis, I am following tutorials I found on the web. After I uploaded my data, I have build a dataset list to process the datasets. During mapping of reads, one of the datasets gave an error. So, I processed this particular once again as a single dataset (worked out this time). Now, I want to add/put back this particular one back to the list. Is that possible at all or can I unbuild the dataset list and then put those single datasets together?

Thanks in advance, Zeynep

galaxy • 306 views
ADD COMMENTlink modified 10 months ago by Martin Čech ♦♦ 4.9k • written 10 months ago by h.z.nenseth0
gravatar for Martin Čech
10 months ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

Dataset lists (or collections) are created immutable (the instance cannot be changed). However I believe you can achieve your goal by using the tools from 'Collection operations' section on Namely using Filter failed tool to remove the erred datasets and then creating a new list with the dataset(s) in ok state and using the Merge Collections tool to create new collection that has all the datasets in ok state.

ADD COMMENTlink written 10 months ago by Martin Čech ♦♦ 4.9k
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