Question: Problem Upload Data File
0
Eric Guo • 60 wrote:
Hi everyone,
I'd like to upload my sequencing data file, 36 GB, onto galaxy. My
data is on a computer cluster in my institute. So I use ssh shell ftp
commands to connect to galaxy and upload the data(ftp> put filename).
And the connection appears to be fine as far as I can tell.
I tried few times. Every time the uploading is fine in the beginning.
However, when about 12 GB of my dataset is uploaded (according to
Galaxy upload file page), the upload stops, and an error message pop
up in the terminal on my Mac saying "a broken pipeline".
I never had this problem before when I was using FTP programs like
CyberDuck. Has anyone have similar problems using ssh command lines to
upload data? What's the correct way to upload data from a computer
cluster?
Thanks in advance for your help.
-Eric
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modified 6.9 years ago
by
Nate Coraor ♦ 3.2k
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written
6.9 years ago by
Eric Guo • 60
