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Question: Local Instance Data Upload
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gravatar for Luciano Cosme
7.1 years ago by
Luciano Cosme • 20
Luciano Cosme • 20 wrote:
Hi, I am trying to set up a ftp server to upload data in my local instance of galaxy but I am having some problems with postgres. I spent a lot of time on it already and could not solve it yet (well I am a biologist). It seems pretty straight forward process at http://wiki.g2.bx.psu.edu/Admin/Config/Upload%20via%20FTP , but I it is just not working. I am running it on Ubuntu 11.10, I have a ftp server set up already, but I can't fix the postgres. Is there any other way to upload data to the local instance without using a ftp server? Well I have all files in same computer where I have galaxy, using a ftp server seems to be a extra step. The only other way that I thought was to upload the compressed files, but I have around 15 files for every sample (14 sample total) and I would have to concatenate them later on. Thank you. Luciano Cosme
galaxy • 1.5k views
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modified 7.1 years ago by Jennifer Hillman Jackson ♦ 25k • written 7.1 years ago by Luciano Cosme • 20
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gravatar for Jennifer Hillman Jackson
7.1 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:
Hello Luciano, Data can be loaded into a Data Library directly from the file system. Using your admin account, first make changes in the universe_wsgi.ini file in the section "# -- Data Libraries": https://bitbucket.org/galaxy/galaxy- central/src/c528fab7ea8c/universe_wsgi.ini.sample Then follow the instructions in this wiki set: http://galaxyproject.org/wiki/Admin/Data%20Libraries/ Start here: http://galaxyproject.org/wiki/Admin/Data Libraries/Uploading Library Files Hopefully this helps. Best, Jen Galaxy team -- Jennifer Jackson http://usegalaxy.org http://galaxyproject.org/wiki/Support
ADD COMMENT • link written 7.1 years ago by Jennifer Hillman Jackson ♦ 25k
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