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Question: Analysis workflow of miRNA-seq data
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gravatar for l.headley17
6 months ago by
l.headley17 • 0
l.headley17 • 0 wrote:

I'm looking to analyse RNA-Seq data from miRNA. How similar is the workflow to RNA-seq analysis?
public mirna galaxy rna-seq • 484 views
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modified 6 months ago by Jennifer Hillman Jackson ♦ 25k • written 6 months ago by l.headley17 • 0
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gravatar for Jennifer Hillman Jackson
6 months ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

The workflow is similar but not exact. Also, alternative/miRNA specific tools are available, sometimes on public servers, but also in the Tool Shed https://usegalaxy.org/toolshed if you are running your own Galaxy (cloud, local, docker) https://galaxyproject.github.io/.

You might want to try the domain-specific public Galaxy server Galaxy-CEFAP: https://galaxyproject.org/public-galaxy-servers/

Related questions: https://biostar.usegalaxy.org/p/27675/, https://biostar.usegalaxy.org/p/16850/

Galaxy tutorials: https://galaxyproject.org/learn/

Thanks! Jen, Galaxy team
ADD COMMENT • link modified 6 months ago • written 6 months ago by Jennifer Hillman Jackson ♦ 25k
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