Similar posts • Search »

• Analysis workflow of miRNA-seq data
  I'm looking to analyse RNA-Seq data from miRNA. How similar is the workflow to RNA-seq analysis?
• De Novo Rna-Seq Workflow
  Hi guys, I am looking for a de novo RNA-seq workflow that uses trinity. Any idea if there is one...
• small RNA seq using Illumina iSeq100
  Hi there, I just made small RNA seq libraries using the Illumina TruSeq Samll RNA LIbrary kit fro...
• Can I analyze my RNA-seq data with TRINITY and/or STAR workflows in Galaxy?
  HI: Can I analyze my RNA-seq data with TRINITY and/or STAR workflows in Galaxy? Where can I find ...
• All fpkm values are 0 (zeros)
  I'm trying to establish a rna-seq workflow to analyse a bacterial transcriptomics, however, when ...
• regarding gff3 file for rna seq analysis (tuxedo workflow) in human
  I want to analyze the rna seq data using tuxedo work flow. i have two replicates for control and ...
• RNA-seq data analysis workflow!
  Hello, I am a newcomer to galaxy based data analysis.I am looking for a workflow to analyse RNA-...
• RNA seq_Galaxy_Tuxedo_reference genome_tomato_does not exist
  Hi, I am trying to analyze my RNA seq data from tomato plants using Tuxedo workflow. However the...
• Help For Alternative Splicing With Rna-Seq Analysis
  I have RNA-seq datasets of several cell types. I want to compare alternative splicing events betw...
• Editing reference genome for TopHat on Trapline
  I am trying to use the Trapline workflow for RNA-Seq data, and have read the manual. I want to ed...
• Creating Heatmap from RNA-seq
  How to create a heatmap using RNA-Seq data? We analyze the RNA-seq using Tophat-Cufflink-Cuffdiff...
• TopHat troubleshooting about metadata
  Hi, I am novice to RNA-Seq Analysis and Galaxy server. Currently am running a work-flow of 40 ste...
• using space bug
  hello admin， I have create a RNA-SEQ workflow and run it, but the results cannot show to me,and i...
• How Good Is Galaxy As A Data Repository And For Cross-Experiment Querying?
  I'm looking for a tool to manage all of our experimental data, not only the workflow but the stor...
• Rna-Seq With Staphylococcus Aureus Strain Newman
  Hello, Would you please add Staphylococcus aureus strain Newman to your database? Workflows to ...
• Cuffdiff No isoform FPKM Tracking and differential testing
  Hi All,  my dataset is an RNA-Seq set from illumina; workflow includes Tophat for Illumina ->...
• Rna-Seq Work Flow Does Not Work
  I'm trying to run the attached workflow to run tophat followed by cuffdiff. But when I hit run a ...
• Bfast For Solid Paired End Reads
  I am new to RNA-Seq and trying to map ABI SOLID paired-end reads. I've read that BFAST + BWA is ...
• RNA Seq workflow with dataset collections
  Hi, I am trying to code a simple rna seq workflow that will use dataset collections. I want to ...
• Job En-Queued, But Not Running
  Hi, I created a workflow ( https://main.g2.bx.psu.edu/u/vijay-uky/w/rna-seq-analysis ) and uploa...
• Re: Using Galaxy For Bacterial Rna-Seq
  Bomba, I'm not familiar enough with bacterial/prokaryotic transcriptomes to suggest a possible w...
• scRNA-Seq analysis Pipeline in Galaxy and importing bulk scRNA Seq data from SRA
  Hi, I am curious if there is a workaround workflow in Galaxy for directly analyzing single Cell ...
• RNA-seq pipeline standard?
  I'm not following the new trends specifically for rna-seq so are there something more innovative ...