How to import my genome (maize B73v3) into galaxy? I have B73v3 in custom-run UCSC genome browser, how do I load that version into Galaxy so I can use my data track tools to explore? I am new to galaxy, but have successfully done this with hg38/38 (but there was a pull down menu for it) - my ucsc genome browser is genomaize.org - thanks HWB
If you are using a public Galaxy server, then the way to use custom genomes is to load them up in fasta format.
- Preparing and using a Custom Reference Genome or Build https://galaxyproject.org/learn/custom-genomes/
Thanks! Jen, Galaxy team
I've loaded a fasta file into my history as a data set - looking for advice & help videos I see "set the tool form's option to use custom genome from history" I can not find anything called tool form options ... (?) how should I proceed? I would like my genome (maize b73v3) which is running on my ucsc browser to show up in the pull-down menu for available genomes - even better, if galaxy would load maizeb73v3 and maizeb73v4 it would be great -it's a multi-billion industry (maize) in US - can I also request that ? thanks again HWB