I am running Read or replace read groups, after loading the data files and quality check with FASTQC and mapping them into BAM format MWA-MEM. This is an assignment in week 4 of Genomic Data Science with Galaxy, a coursera course. The program has been running in Galaxy for ore than 14 hours. I am unable to modify it. Should I stop it or wait. Please advise
It is best to allow queued jobs to stay queued. Deleting and rerunning will extend wait time as the restarted job is added back to the end of the queue.
Other problems might lead to what looks like a queued job. For example, double check that the inputs are all in a success (green) state, with no warnings.
- https://galaxyproject.org/support/#datasets-and-histories >> Datasets and how jobs execute
Thanks, Jen, Galaxy team