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• Trouble loading fastq data
  Hi, I have difficulty uploading one of my input file for a pair-end (two separate input files)....
• workflow data input from a file
  I have uploaded someone's else workflow into Galaxy. How to put data from datasets into input dat...
• Having issues uploading csv files as tables into galaxy
  I am trying to upload some data sets that are in csv format and I am having issues with galaxy fo...
• ftp file upload local server
  Hi, i want to upload large files through ftp on local server, earlier i was using galaxy main wh...
• MACS2 input not recognized by tool
  Hi all, I've been using Galaxy to analyze my ChIP-seq data, and have managed to get the program ...
• Tools does not recognize input dataset: set proper datatype metadata
  My NGS files are fastq files but not recognized by Bowttie2 or Map with Bowtie for Illumina from ...
• Inputs not recognized by tool
  I have uploaded two bam files to Galaxy to generate HTSeq counts. However, both my bam file and g...
• hgvs_vcf input format?
  For the HGVS_VCF package it appears the input format is simply a tabular file. I uploaded a .txt...
• Display a file stored in database
  hii I am integrate a softsearch tool in galaxy it takes two input  1)Fasta file  2)Bam file both...
• Error During Data Upload Of Fastq.Gz
  hi, Maybe anybody can give me a hint for the following problem... When I try to upload a fastq.g...
• Which Tools Can A File Be Used With?
  I'm starting to poke around wtih Galaxy. Suppose I have a file that I've uploaded, or pulled in ...
• Upload of fastq files in the workflow
  Dear All, I successfully upload couple of files (fastq) using cyberduck in the server usegalaxy.o...
• Tuxedo_Custome build genome
  I have uploaded tomato genome in GFF3 and FASTA format in galaxy. However, when I run Tuxedo, my ...
• Jobs on local galaxy instance stuck in "New" state - Data Library datasets to blame?
  After updating our Galaxy instance to use two processes (one for web, the other as a job handler)...
• Error due to format of uploaded fastq data
  Hello Everyone, I am a new to RNA-Seq and Galaxy. I tried to analyse my RNA-Seq data from RAT (...
• Batch Jobs...
  Hi, I've created a workflow that works well. The workflow accepts 2 input files. After uploadi...
• Using Tool On Input Data Set
  Hello, I'm new to Galaxy and have a very basic question.  If I upload a dataset, (say, a pr...
• Uploading Files Via Ftp
  Hi, Am trying to configure galaxy to enable file upload via FTP. My server is configured with SF...
• Cloudman instance: Tophat error
  Hello community, I am encountering the following error when I try to run Tophat Galaxy Version 0...