I manage our private instance of Galaxy on Jetstream. I am having all kinds of issues installing new tools. I have made sure to enable Conda but I haven't been able to successfully install many tools. One example would be with CutAdapt. It looked like it installed just fine but when I run the tool I get this error:
ERROR: Running in parallel is currently not supported for the given combination of command-line parameters. These options are not supported: --info-file, --rest-file, --wildcard-file, --untrimmed-output, --untrimmed-paired-output, --too-short-output, --too-short-paired-output, --too-long-output, --too-long-paired-output, --format, --colorspace
Can anyone help so that I can figure out how to actually manage my Galaxy instance? Thanks in advance.