Question: (Closed) inquiry about the reference genome and SNPs
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gravatar for 17317822349
8 months ago by
17317822349 • 10
17317822349 • 10 wrote:

Dear Sir/Madam: How do you do?I am a new user of Galaxy.And i have been exploring how to analyse the WGS result of a C.elegans mutant,looking forward to find the mutant gene. In fact,the mutant gene is under N2 backgroud ,and other gene is under both N2 and CB4856 background.So in my view ,i have to get a verison of N2 reference genome as the reference genome,what's more ,i need unfiltered and filtered files about SNPs present in N2. But i have no idea about where and how to get them. The last but not the least query is if there are any version of CB4856 reference genome in wormbase or UCSC? I will appreciate it if you can give me some suggestion . Best Regards Alice

wgs analysis • 208 views
ADD COMMENT • link • written 8 months ago by 17317822349 • 10

Hello 17317822349!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

PS: Please continue this conversation in the original thread. I'll add some help for using a Custom reference genome.
ADD REPLY • link written 8 months ago by Jennifer Hillman Jackson ♦ 25k
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