Question: (Closed) inquiry about the reference genome and SNPs
gravatar for 17317822349
8 months ago by
1731782234910 wrote:

Dear Sir/Madam: How do you do?I am a new user of Galaxy.And i have been exploring how to analyse the WGS result of a C.elegans mutant,looking forward to find the mutant gene. In fact,the mutant gene is under N2 backgroud ,and other gene is under both N2 and CB4856 background.So in my view ,i have to get a verison of N2 reference genome as the reference genome,what's more ,i need unfiltered and filtered files about SNPs present in N2. But i have no idea about where and how to get them. The last but not the least query is if there are any version of CB4856 reference genome in wormbase or UCSC? I will appreciate it if you can give me some suggestion . Best Regards Alice

wgs analysis • 208 views
ADD COMMENTlink written 8 months ago by 1731782234910

Hello 17317822349!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.


PS: Please continue this conversation in the original thread. I'll add some help for using a Custom reference genome.
ADD REPLYlink written 8 months ago by Jennifer Hillman Jackson25k
Please log in to add an answer.
The thread is closed. No new answers may be added.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 175 users visited in the last hour