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Question: Help with CummeRbund graphs
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gravatar for luleomil
14 months ago by
luleomil • 0
luleomil • 0 wrote:

Hello everybody,

I´m doing a RNAseq analysis but when I will do a scatter plot or volcano plot I can´t do this because I can´t determine the sample name for axis X and Y. There is no option for this. The same happens to volcano graph too. Can anyone help me? Thank you a lot.
rna-seq • 314 views
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modified 14 months ago by Jennifer Hillman Jackson ♦ 25k • written 14 months ago by luleomil • 0
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gravatar for Jennifer Hillman Jackson
14 months ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

The problem is with the cummeRbund tool itself and other tools that use SQLite inputs for graph functions.

The technical reasons are detailed an existing ticket. Please follow for progress on the correction here: https://github.com/galaxyproject/tools-devteam/issues/340

Thanks for reporting the problem! Jen, Galaxy team
ADD COMMENT • link written 14 months ago by Jennifer Hillman Jackson ♦ 25k
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