I have a problem while trying to install my own tool on a Galaxy Docker instance. I have modify job_conf.xml correctly and i have included my_tools folder to Galaxy container. Whenever i am tying to run my tool (the tools are catDocker and SADI-Docker) i am getting this error:
container_linux.go:262: starting container process caused "exec: \"/export/galaxy-central/database/job_working_directory/000/42/tool_script.sh\": stat /export/galaxy-central/database/job_working_directory/000/42/tool_script.sh: no such file or directory"
The other tools are running just fine. Can you help about this?
Thanks a lot,
Are you running Galaxy inside of docker, the jobs inside of their own docker containers, or both?
I am running both