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• IOError: [Errno 2] No such file or directory: '/galaxy-repl/main/scratch2/tmppqOf7j'
  I am trying to do statistics and get this error: Traceback (most recent call last): File "/gal...
• Merge function is not working on test.galaxyproject.org
  Error message as follows: Traceback (most recent call last): File "/galaxy/test/migrated_tools/t...
• Question About Fetching Sequence From Genome
  Hi I want to fetch sequence from soybean genome, according to a gff file. My gff3 file and genom...
• Cufflinks Failure Error - Solution: use version 2.2.1.2 or later
  Hello, I've been trying to run cufflinks on my bam files for the last couple of house and keep ...
• After update my Galaxy won't start - ImportError: No module named error_level
  After update my galaxy,there is an error,as blow: root@kick-virtual-machine:~/galaxy-dist# sh ru...
• Megablast tool not working
  Megablast Galaxy Tool Version 1.2.0 is not working in online galaxy. Error is given below, Tra...
• Rank Terms Error message
  Hello Any idea what the propblem below may be? Henrik   428 Rank Terms on data 418 and data 4...
• "Operate on Genomics Intervals" not working properly
  As of 3/13/15  12:30 pm EST,  your "Operate on Genomics Intervals" functions are giving many erro...
• Fail to upload data to local Galaxy 16.07
  Hi, I have a new (fresh) install of the Galaxy 16.07 (change_set 727270261750fc71979e7ba9fec96b...
• Extract Genomic DNA using coordinates from a gff file
  Hi, I have been extracting genomic sequences, using "Extract genomic DNA" from "Fetch Alignment...
• Cufflinks dependency problem error - Solution: use version 2.2.1.2 or later
  Hi, Recently, I met an error when I tried the cufflinks in Galaxy. It reports an error: Tra...
• ImportError: cannot import name email_mime_text
  I set up a galaxy server. I can upload and delete data but can not permanently delete data from ...
• an error occurred while getting updates from server.
  I persistently got this error from my local galaxy instance. Any idea about it? thanks so muc...
• Stitch Gene blocks fail
  Good Morning to everyone. I am quite new in using Galaxy. In these last weeks I am trying to stit...
• CPC2 biopython error: ImportError: No module named Bio.Seq
  Hi, I add a custom tool, CPC2 (coding potential calculator). When it runs, CPC2 need biopython a...
• Galaxy101: downloading Chr22 exon data
  I have (repeatedly) received the following error trying to download data from the UCSC browser to...
• Error Running Galaxy On Windows Xp
  Hello developers. I have just installed Galaxy on my Windows XP machine to try it out. I am havin...
• IGGalaxy: problem with IMGT Loader
  Hi all! From some days I've been trying to use IGGalaxy but I got stuck when I tried to use IMGT...
• While Executing Tool Galaxy Giving This Error
  hi, will you please help me how can i fix this error' thanks Traceback (most recent call last):...
• Tool error "IOError: [Errno 2] No such file or directory"
  I receive the following error while running tophat: Traceback (most recent call last): File "/gal...