Question: CPC2 biopython error: ImportError: No module named Bio.Seq
0
gravatar for chenzhuod
6 months ago by
chenzhuod • 30
chenzhuod • 30 wrote:

Hi,

I add a custom tool, CPC2 (coding potential calculator). When it runs, CPC2 need biopython as requirement. But, it occurs an error:

Traceback (most recent call last):

File "/home/galaxy/tools/myTools/CPC2-beta/bin/CPC2.py", line 11, in <module>

from Bio.Seq import Seq

ImportError: No module named Bio.Seq

I have installed biopython, and add

<requirement type="package" version="1.61">biopython</requirement>

in xml file.

What's wrong?

Siyuan

rna-seq • 379 views
ADD COMMENT • link • written 6 months ago by chenzhuod • 30
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