Question: Regarding program running in galaxy
gravatar for supinderkr
19 months ago by
supinderkr10 wrote:

Hi my all mutants are showing error for Select Variants on data 3 and data 31 (log) tool I dont know why please suggest.

error job gatk • 469 views
ADD COMMENTlink modified 19 months ago by Jennifer Hillman Jackson25k • written 19 months ago by supinderkr10
gravatar for Jennifer Hillman Jackson
19 months ago by
United States
Jennifer Hillman Jackson25k wrote:


All GATK tools at have been deprecated and are no longer supported. I don't think that the tool authors of the updated GATK tools in the Tool Shed (for a local or cloud Galaxy) are supporting these tools anymore either, due to licensing and other complications.

Instead, we suggest using alternative methods/tools for variant analysis. Please see the tutorials here:

Thanks, Jen, Galaxy team

ADD COMMENTlink written 19 months ago by Jennifer Hillman Jackson25k
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