Question: Regarding program running in galaxy
gravatar for supinderkr
8 months ago by
supinderkr0 wrote:

Hi my all mutants are showing error for Select Variants on data 3 and data 31 (log) tool I dont know why please suggest.

error job gatk • 160 views
ADD COMMENTlink modified 8 months ago by Jennifer Hillman Jackson23k • written 8 months ago by supinderkr0
gravatar for Jennifer Hillman Jackson
8 months ago by
United States
Jennifer Hillman Jackson23k wrote:


All GATK tools at have been deprecated and are no longer supported. I don't think that the tool authors of the updated GATK tools in the Tool Shed (for a local or cloud Galaxy) are supporting these tools anymore either, due to licensing and other complications.

Instead, we suggest using alternative methods/tools for variant analysis. Please see the tutorials here:

Thanks, Jen, Galaxy team

ADD COMMENTlink written 8 months ago by Jennifer Hillman Jackson23k
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