Question: Galaxy log files - processing and errors
0
gravatar for njoebott
18 months ago by
njoebott30
njoebott30 wrote:

I am trying to troubleshoot an error - explained here: https://biostar.usegalaxy.org/p/21765/#22550

Where can I find all of the process and/or error messages that are associated with trying to install tools? That is, where can I find the file location where the following errors are stored that are present from the GUI:

File "/home/galaxy/galaxy/lib/tool_shed/galaxy_install/install_manager.py", line 121, in install_and_build_package_via_fabric tool_dependency = self.install_and_build_package( install_environment, tool_dependency, actions_dict ) File "/home/galaxy/galaxy/lib/tool_shed/galaxy_install/install_manager.py", line 79, in install_and_build_package initial_download=True ) File "/home/galaxy/galaxy/lib/tool_shed/galaxy_install/tool_dependencies/recipe/recipe_manager.py", line 31, in execute_step initial_download=initial_download ) File "/home/galaxy/galaxy/lib/tool_shed/galaxy_install/tool_dependencies/recipe/step_handler.py", line 665, in execute_step dir = self.url_download( work_dir, downloaded_filename, url, extract=True, checksums=checksums ) File "/home/galaxy/galaxy/lib/tool_shed/galaxy_install/tool_dependencies/recipe/step_handler.py", line 165, in url_download raise Exception( err_msg )

Error downloading from URL http://depot.galaxyproject.org/package/source/gops-1.0-st.tgz : <urlopen error="" [ssl:="" certificate_verify_failed]="" certificate="" verify="" failed="" (_ssl.c:590)&gt;&lt;="" p="">

galaxy • 392 views
ADD COMMENTlink written 18 months ago by njoebott30
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