Question: Velvetoptimiser Error
gravatar for Makis Ladoukakis
6.9 years ago by
Makis Ladoukakis30 wrote:
Dear Galaxy users, Has anyone worked with velvetoptimiser tool from the Tool shed? I have been trying both the stable and the test version of the velvetoptimiser tool and i keep getting the same error: Traceback (most recent call last): File "/home/ladoukef/galaxy_dist/tools/myTools/velvetoptimiser/velve", line 102, in if __name__ == "__main__": __main__() File "/home/ladoukef/galaxy_dist/tools/myTools/velvetoptimiser/velve", line 67, in __main__ for line in open(contigs_path ): IOError: [Errno 2] No such file or directory: 'contigs.fa' Can someone identify where the error is? The file missing (contigs.fa) is supposed to be built by the tool itself. Thank you, Efthymios Ladoukakis
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ADD COMMENTlink modified 6.9 years ago by Greg Von Kuster810 • written 6.9 years ago by Makis Ladoukakis30
gravatar for Greg Von Kuster
6.9 years ago by
Penn State University
Greg Von Kuster810 wrote:
Hello Efthymios, In case no one on this list answers, you may be able to get an answer to your question by contacting the owner of the velvetoptimiser repository. You can do this by selecting the "Contact repository owner" menu item on the View repository page. Greg Von Kuster Galaxy Development Team
ADD COMMENTlink written 6.9 years ago by Greg Von Kuster810
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