Question: Delete Data Library Manually
0
Jean-Baptiste Denis • 20 wrote:
Hello everybody,
i'm a sysadmin in charge of installing a Galaxy server. I'm a totally
beginner regarding this software.
I've installed Galaxy using the documentation on the wiki (with Apache
as a proxy and postgresql as database) and everything went fine.
I've tried to create a new library as a galaxy admin. I've added a
dataset using "Upload files from filesystem paths" without copying
data into galaxy. To test the behaviour of Galaxy in a weird situation
i've added "/" (:D), clicked on "Upload to library" and closed the
navigation tab after one minute.
As a result, the new data library appears under the "Manage data
libraries" page. But, when i click on it, i've got a server error.
Here is the traceback :
....
File
'/home/galaxy/galaxy-dist/database/compiled_templates/library/common/b
rowse_library.mako.py',
line 229 in render_render_content
if not trans.app.security_agent.library_is_public( library,
contents=True ):
File '/home/sis/jbdenis/galaxy-dist/lib/galaxy/security/__init__.py',
line 541 in library_is_public
File '/home/sis/jbdenis/galaxy-dist/lib/galaxy/security/__init__.py',
line 559 in folder_is_public
File '/home/sis/jbdenis/galaxy-dist/lib/galaxy/security/__init__.py',
line 559 in folder_is_public
File '/home/sis/jbdenis/galaxy-dist/lib/galaxy/security/__init__.py',
line 559 in folder_is_public
File '/home/sis/jbdenis/galaxy-dist/lib/galaxy/security/__init__.py',
line 562 in folder_is_public
AttributeError: 'NoneType' object has no attribute 'dataset'
My question is : how can i delete this library without messing with
the
database consistency?
Any hints ?
ADD COMMENT
• link
•
modified 7.9 years ago
by
Greg Von Kuster ♦ 810
•
written
7.9 years ago by
Jean-Baptiste Denis • 20
