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• Tophat taking too much time
  Is this a server error or data size overload?? Tophat is still running since long time. I got res...
• failure to upload file via FTP
  I am trying to upload a 18 GB fastq file using FileZilla. It failed several times after transferr...
• Galaxy Server Is Down Or Up ??
  i am using mapping with Bowtie and its taking unexcepted time..i usally mapp data with bowtie in ...
• Cannot see datasets in Shared Data
  Hi, I am new to galaxy and I tried accessing it after a long time today and I cannot seem to see ...
• how can i upload my data in GigaGalaxy for assembly
  I need to use the tool "NGS:SOAPdenovo" in GigaGalaxy when I upload my data in GigaGalaxy then it...
• Disk usage over quota after permanent delete
  My account continues to show that I am over the quota after data sets are permanently deleted. Is...
• what is the differences between GigaGalaxy and Galaxy?Why upload data in GigaGalaxy take so much time still unfinished?
  What is the differences between GigaGalaxy and Galaxy? I need to use the tool "NGS:SOAPdenovo2" i...
• Data managers tool: the content of data table disappear after restart Galaxy
  Hi there, I am developing a data managers tool to add trained data. The tool works and can creat...
• (No Subject)
  Hi Dear Is there anybody whom I can share my data with? I have an important question that I tried...
• How to join to data-sets correctly?
  Hi, I'm having difficulty in joining to data-sets to find the number of repeats in coding exons i...
• Trimmomatic output results in extremely low alignment using bowtie2
  Hello, I have trimmed by paired end data RNA seq (Illumina Miseq) data using trimmomatic. Howeve...
• (No Subject)
  Hi Dear Is there anybody whom I can share my data with? I have an important question that I trie...
• Server timeout with FTP upload
  Hi guys, I am trying to upload some data via FTP (FileZilla) and the connection keeps dropping. ...
• Low alignment for paired end reads using HISAT2
  Hello, I am new to processing and analysis of RNAseq data. I have recently completed a paired-en...
• Tophat jobs exceeding maximum allowed job run time
  Hello, I have a question regarding the mapping of RNA-seq data. I am hitting a wall, because som...
• Galaxy Cloudman Login
  Hello, I have galaxy cloudman running and had tried one time success to log in to retain the pre...
• Trinity job not running
  Hi, I've been having a lot of trouble with Trinity. I'm trying to do de novo assembly with paired...
• Longer job queue times at https://usegalaxy.org
  hi I am trying run tophat and cufflink (online version) but the data is not executing and it st...
• Will my data be deleted from galaxy after a certain amount of time?
  Hi there, I have a standard galaxy account. Will my data be deleted from galaxy after a certain ...
• Trinity queue times
  every time Trinity is showing error. the tool is not processing the seq data. Is there any altern...
• Request extra space on Galaxy
  Hello Galaxy personal, I would like to know if I can have more space for a certain period of time...