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Question: How to import a published workflow from a Galaxy server to my server?
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gravatar for rioualen
22 months ago by
rioualen • 10
France
rioualen • 10 wrote:

Hello,

I would like to try to use published workflow. I found a list here. I can either "import" them or "save as file". I don't want to chose import cause I want to use them in my own server. If I save as a file it gives me a .json like file, with a .ga extension. How can I use that file then?

Another option is to go the Admin section of my server, select "Search Tool Shed" "Galaxy Main toolshed" "search for workflows", but the list of published workflows is then much smaller...

Also, is it possible for users that are not Admins on theirs servers to somehow look for and use published workflows?

Thanks!
workflow • 691 views
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modified 22 months ago by Jennifer Hillman Jackson ♦ 25k • written 22 months ago by rioualen • 10
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gravatar for Jennifer Hillman Jackson
22 months ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

After saving the .ga file, on your own server's GUI go the top menu item Workflows. Click on it. On the workflow hub page is a button to upload workflows.

Any Published data is accessible by any user on the instance, admin or not. Published data is listed under the top menu item Shared Data. Import a copy of someone's published workflow, history, etc in order to work with it as your own.

Hope this helps, Jen, Galaxy team
ADD COMMENT • link modified 22 months ago • written 22 months ago by Jennifer Hillman Jackson ♦ 25k

Thank you, I'd missed that one apparently!

Is there a way to find demo datasets to test workflows from the Galaxy team? Like this one for example: https://usegalaxy.org/u/galaxyproject/w/variant101

Thanks again

ADD REPLY • link written 22 months ago by rioualen • 10
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